close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI48593.1Heavy-metal resistance. (204 aa)    
Predicted Functional Partners:
SFI48560.1
Hypothetical protein.
 
     0.956
SFI48529.1
RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.908
SFI48502.1
Ca2+-binding protein, EF-hand superfamily.
 
     0.738
SFI61954.1
Multi-sensor hybrid histidine kinase.
    
 0.618
SFI75555.1
Hypothetical protein.
  
     0.604
SFK10478.1
Hypothetical protein.
  
     0.584
SFI47949.1
Endonuclease/Exonuclease/phosphatase family protein.
  
     0.566
SFI62364.1
Protein of unknown function.
  
     0.557
SFK07146.1
Protein of unknown function.
  
  
 0.511
SFJ21245.1
Hypothetical protein.
  
     0.495
Your Current Organism:
Celeribacter neptunius
NCBI taxonomy Id: 588602
Other names: C. neptunius, CIP 109922, Celeribacter neptunius Ivanova et al. 2010, DSM 26471, KMM 6012, alpha proteobacterium H 14, strain H 14
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.