STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ08715.1Ni/Fe-hydrogenase 1 B-type cytochrome subunit. (259 aa)    
Predicted Functional Partners:
SFJ08782.1
Hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 0.999
SFJ08811.1
Hydrogenase small subunit.
 
 
 0.998
SFJ08888.1
Hydrogenase large subunit.
 
 
 0.996
SFJ09286.1
Hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 0.996
SFJ08926.1
Ferredoxin hydrogenase small subunit.
 
 
 0.995
SFJ09404.1
Hydrogenase small subunit.
 
 
 0.994
SFJ08559.1
Hydrogenase-1 operon protein HyaF.
 
  
 0.982
SFJ08605.1
Hydrogenase-1 operon protein HyaE; Belongs to the HupG/HyaE family.
 
  
 0.982
SFJ09211.1
Hypothetical protein.
 
 
 0.977
SFJ08681.1
Hydrogenase 1 maturation peptidase HyaD. Aspartic peptidase. MEROPS family A31.
 
  
 0.955
Your Current Organism:
Celeribacter neptunius
NCBI taxonomy Id: 588602
Other names: C. neptunius, CIP 109922, Celeribacter neptunius Ivanova et al. 2010, DSM 26471, KMM 6012, alpha proteobacterium H 14, strain H 14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.