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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ43266.1Signal transduction histidine kinase. (319 aa)    
Predicted Functional Partners:
SFI66506.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.981
SFK29195.1
Hypothetical protein.
 
 0.963
SFI61954.1
Multi-sensor hybrid histidine kinase.
 
 0.957
pdhA
2-oxoisovalerate dehydrogenase E1 component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
   
 0.895
SFI78500.1
Two-component system, OmpR family, phosphate regulon response regulator PhoB.
  
  0.863
SFI91836.1
Response regulator receiver domain-containing protein.
  
  0.861
SFJ86826.1
Response regulator receiver domain-containing protein.
  
  0.851
SFJ55146.1
Two-component system, OmpR family, phosphate regulon response regulator OmpR.
  
  0.841
SFK14401.1
Two-component system, OmpR family, response regulator ChvI.
  
  0.835
SFJ80319.1
Two-component system, OmpR family, response regulator TctD.
  
  0.834
Your Current Organism:
Celeribacter neptunius
NCBI taxonomy Id: 588602
Other names: C. neptunius, CIP 109922, Celeribacter neptunius Ivanova et al. 2010, DSM 26471, KMM 6012, alpha proteobacterium H 14, strain H 14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.