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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ92099.1Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-); Belongs to the binding-protein-dependent transport system permease family. (334 aa)    
Predicted Functional Partners:
SFJ92130.1
Rhamnose ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.995
rbsA
Rhamnose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.993
SFJ92190.1
Rhamnose-binding protein.
 0.992
SFJ92046.1
Sugar (pentulose or hexulose) kinase.
 
  
 0.934
SFJ40644.1
Ribose transport system ATP-binding protein.
 0.919
rhaM
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
 
    0.903
SFJ70119.1
Mannose-binding protein/fructose-binding protein/ribose-binding protein.
 
 0.855
SFJ70058.1
Mannose ABC transporter ATP-binding protein.
 0.843
SFJ53621.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-).
 
 0.806
SFI87901.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-).
 0.804
Your Current Organism:
Celeribacter neptunius
NCBI taxonomy Id: 588602
Other names: C. neptunius, CIP 109922, Celeribacter neptunius Ivanova et al. 2010, DSM 26471, KMM 6012, alpha proteobacterium H 14, strain H 14
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