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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK17594.1DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (295 aa)    
Predicted Functional Partners:
SFJ81005.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.702
SFK17623.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
     0.647
SFI50424.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.634
SFK26071.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.589
SFI69166.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.588
SFI85093.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.575
SFJ96835.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.548
SFI85261.1
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family.
  
     0.529
SFJ68719.1
ModE molybdate transport repressor domain-containing protein; Belongs to the LysR transcriptional regulatory family.
  
     0.526
SFJ85231.1
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family.
  
     0.491
Your Current Organism:
Celeribacter neptunius
NCBI taxonomy Id: 588602
Other names: C. neptunius, CIP 109922, Celeribacter neptunius Ivanova et al. 2010, DSM 26471, KMM 6012, alpha proteobacterium H 14, strain H 14
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