STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0BER7_PARTEUncharacterized protein. (241 aa)    
Predicted Functional Partners:
A0CEH2_PARTE
Uncharacterized protein.
   
 
 0.494
A0CEH3_PARTE
Uncharacterized protein.
   
 
 0.494
A0CH90_PARTE
Uncharacterized protein.
   
 
 0.494
A0CTP2_PARTE
Uncharacterized protein.
   
 
 0.494
A0BCL4_PARTE
NYD-SP28 domain-containing protein.
    
 
 0.475
A0C9H2_PARTE
NYD-SP28 domain-containing protein.
    
 
 0.475
A0DGK0_PARTE
NYD-SP28 domain-containing protein.
    
 
 0.475
A0DPB8_PARTE
NYD-SP28 domain-containing protein.
    
 
 0.475
A0BT34_PARTE
GAS domain-containing protein.
    
 
 0.452
A0BZD8_PARTE
GAS domain-containing protein.
    
 
 0.452
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.