STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0BPP2_PARTERING-type domain-containing protein. (1234 aa)    
Predicted Functional Partners:
A0BH81_PARTE
Uncharacterized protein.
     
 
0.540
A0BHH0_PARTE
Uncharacterized protein.
     
  0.540
A0BNV3_PARTE
Uncharacterized protein.
     
 
0.540
A0BS38_PARTE
Uncharacterized protein.
     
  0.540
A0BTP1_PARTE
Vps8 domain-containing protein.
     
 
0.540
A0C012_PARTE
Vps16_N domain-containing protein.
     
  0.540
A0C013_PARTE
Uncharacterized protein.
     
  0.540
A0C193_PARTE
RING-type domain-containing protein.
     
  0.540
A0C476_PARTE
Vps8 domain-containing protein.
     
 
0.540
A0C7C6_PARTE
Uncharacterized protein.
     
 
0.540
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.