STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0BUF3_PARTEPX domain-containing protein. (371 aa)    
Predicted Functional Partners:
A0BKS9_PARTE
Uncharacterized protein.
   
 
 0.942
A0C0R0_PARTE
JmjC domain-containing protein.
    
 0.942
A0D6Z2_PARTE
JmjC domain-containing protein.
    
 0.942
A0CV46_PARTE
AAA_23 domain-containing protein.
    
 0.888
A0D0I8_PARTE
ANK_REP_REGION domain-containing protein.
   
 0.860
A0DUM4_PARTE
Mre11_DNA_bind domain-containing protein.
    
 0.843
A0E597_PARTE
Mre11_DNA_bind domain-containing protein.
    
 0.843
A0BED6_PARTE
Histone H2A; Belongs to the histone H2A family.
    
 0.836
A0C2C9_PARTE
Histone H2A; Belongs to the histone H2A family.
    
 0.836
A0CD29_PARTE
Histone H2A; Belongs to the histone H2A family.
    
 0.836
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.