STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0CDN6_PARTECysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (406 aa)    
Predicted Functional Partners:
A0BE40_PARTE
Autophagy-related protein.
   
 0.929
A0BFQ7_PARTE
Autophagy-related protein.
   
 0.929
A0BSW0_PARTE
Autophagy-related protein.
   
 0.929
A0BZK8_PARTE
Autophagy-related protein.
   
 0.929
A0CH76_PARTE
Autophagy-related protein.
   
 0.929
A0CRP1_PARTE
Autophagy-related protein.
   
 0.929
A0CWE3_PARTE
Autophagy-related protein.
   
 0.929
A0CWS8_PARTE
Autophagy-related protein.
   
 0.929
A0DB29_PARTE
Autophagy-related protein.
   
 0.929
A0DD29_PARTE
Autophagy-related protein.
   
 0.929
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.