STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0CKK8_PARTEUncharacterized protein. (743 aa)    
Predicted Functional Partners:
A0E7V5_PARTE
RRM domain-containing protein.
    
 
 0.644
A0CNK0_PARTE
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.557
A0BCX8_PARTE
Transket_pyr domain-containing protein.
      
 0.545
A0EI22_PARTE
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
      
 0.543
A0CCX9_PARTE
CHY-type domain-containing protein.
      
 0.538
A0BFX1_PARTE
HD domain-containing protein.
      
 0.534
A0CME0_PARTE
AA_TRNA_LIGASE_II domain-containing protein.
      
 0.489
A0D379_PARTE
AA_TRNA_LIGASE_II domain-containing protein.
      
 0.489
A0C8M8_PARTE
Uncharacterized protein.
      
 0.440
A0EEU3_PARTE
tRNA-binding domain-containing protein.
      
 0.438
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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