STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0CRU8_PARTEUncharacterized protein. (201 aa)    
Predicted Functional Partners:
A0BGR3_PARTE
Uncharacterized protein.
   
 0.980
A0EGT6_PARTE
Uncharacterized protein.
   
 0.980
A0CLJ4_PARTE
TAF domain-containing protein.
   
 0.979
A0CZU1_PARTE
TAF domain-containing protein.
   
 0.979
A0BXM5_PARTE
DUF3591 domain-containing protein.
    
 0.978
A0D5W6_PARTE
DUF3591 domain-containing protein.
    
 0.978
A0DFX5_PARTE
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.978
A0DUG6_PARTE
CYCLIN domain-containing protein.
   
 0.978
A0E531_PARTE
CYCLIN domain-containing protein.
   
 0.978
A0BL34_PARTE
Uncharacterized protein.
    
 0.977
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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