STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0CU71_PARTECalponin-homology (CH) domain-containing protein. (111 aa)    
Predicted Functional Partners:
A0CDB7_PARTE
WD_REPEATS_REGION domain-containing protein.
    
   0.816
A0DK60_PARTE
WD_REPEATS_REGION domain-containing protein.
    
   0.816
A0E0P2_PARTE
WD_REPEATS_REGION domain-containing protein.
    
   0.816
A0C1P9_PARTE
WD_REPEATS_REGION domain-containing protein.
  
 
   0.530
A0CBI9_PARTE
WD_REPEATS_REGION domain-containing protein.
  
 
   0.528
A0DJC2_PARTE
Uncharacterized protein.
  
 
   0.500
A0BN95_PARTE
Phosphoglycerate kinase.
   
 
 0.485
A0D213_PARTE
Uncharacterized protein.
   
 
 0.485
A0D4I0_PARTE
Uncharacterized protein.
   
 
 0.485
A0E4B1_PARTE
Phosphoglycerate kinase.
   
 
 0.485
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.