STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0CY22_PARTESignal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (507 aa)    
Predicted Functional Partners:
A0C377_PARTE
TPR_REGION domain-containing protein.
   
 0.990
A0CE94_PARTE
TPR_REGION domain-containing protein.
   
 0.990
A0DTL4_PARTE
Uncharacterized protein.
   
 0.990
A0DUQ8_PARTE
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
    
 0.990
A0E1G9_PARTE
Uncharacterized protein.
   
 0.990
A0E5C9_PARTE
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
    
 0.990
PTMB.431c
40s ribosomal protein S15, putative; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.985
A0E7D9_PARTE
SRP54 domain-containing protein.
 
0.972
A0EG60_PARTE
SRP54 domain-containing protein.
  
 0.968
IBLD0023
Ribosomal protein L4, putative.
  
 0.968
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.