STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0DIE7_PARTEUncharacterized protein. (294 aa)    
Predicted Functional Partners:
A0EI22_PARTE
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 0.940
A0CLP3_PARTE
tRNA (guanine(26)-N(2))-dimethyltransferase.
    
 
 0.898
A0BVY9_PARTE
PUA domain-containing protein.
   
 
 0.693
A0C0T4_PARTE
PUA domain-containing protein.
   
 
 0.693
A0DJ25_PARTE
PseudoU_synth_1 domain-containing protein.
   
 
 0.622
A0E7K0_PARTE
PseudoU_synth_1 domain-containing protein.
   
 
 0.622
A0DFY8_PARTE
tRNA pseudouridine synthase.
   
 
 0.609
A0BVU8_PARTE
TRUD domain-containing protein.
   
 
 0.544
A0E7K1_PARTE
tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family.
  
 
 0.523
A0EAZ6_PARTE
tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family.
  
 
 0.523
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.