STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0DJ55_PARTEAA_TRNA_LIGASE_II domain-containing protein. (769 aa)    
Predicted Functional Partners:
A0BPT3_PARTE
Tr-type G domain-containing protein.
  
 0.945
A0CNK0_PARTE
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.934
A0DC27_PARTE
RF_PROK_I domain-containing protein.
  
 
 0.915
A0BD97_PARTE
Uncharacterized protein.
  
 
 0.899
A0CSQ3_PARTE
RRF domain-containing protein.
  
 
 0.892
A0CF63_PARTE
Elp3 domain-containing protein.
   
 
 0.891
PTMB.225
40S ribosomal protein S29, putative.
   
 
 0.891
A0BTJ8_PARTE
Ribosomal_L18e/L15P domain-containing protein.
   
 
 0.888
A0C4B5_PARTE
Ribosomal_L18e/L15P domain-containing protein.
   
 
 0.888
A0E5P6_PARTE
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.885
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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