STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0DLN4_PARTEArginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family. (591 aa)    
Predicted Functional Partners:
A0BM90_PARTE
Uncharacterized protein.
   
 
 0.684
A0C4E2_PARTE
UBR-type domain-containing protein.
   
 
 0.684
A0CE98_PARTE
Uncharacterized protein.
   
 
 0.684
A0C2P2_PARTE
Nt_Gln_amidase domain-containing protein.
      
 0.437
A0DGM8_PARTE
Uncharacterized protein.
      
 0.434
A0DN77_PARTE
S1-like domain-containing protein.
     
 0.423
A0EIP4_PARTE
S1-like domain-containing protein.
     
 0.423
A0BJW9_PARTE
UBR-type domain-containing protein.
   
 
 0.402
A0BZ33_PARTE
UBR-type domain-containing protein.
   
 
 0.402
A0DH04_PARTE
UBR-type domain-containing protein.
   
 
 0.402
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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