STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0DLP9_PARTED-aminoacyl-tRNA deacylase. (186 aa)    
Predicted Functional Partners:
A0CE39_PARTE
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
  
 0.645
A0CNK0_PARTE
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.638
A0D4Q5_PARTE
Tyrosine--tRNA ligase.
     
 0.634
A0CME0_PARTE
AA_TRNA_LIGASE_II domain-containing protein.
     
 0.631
A0D379_PARTE
AA_TRNA_LIGASE_II domain-containing protein.
     
 0.631
A0DN87_PARTE
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.627
A0EIQ2_PARTE
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.627
A0EEU3_PARTE
tRNA-binding domain-containing protein.
  
  
 0.619
A0CU85_PARTE
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
     
 0.615
PTMB.14c
Co-chaperone GrpE, putative; Belongs to the GrpE family.
   
  
 0.590
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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