A0DQK3_PARTE protein (Paramecium tetraurelia)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0DQK3_PARTE

Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (368 aa)

Predicted Functional Partners:

A0BDJ3_PARTE

0.867

A0BWM1_PARTE

0.867

A0C5P1_PARTE

0.867

A0C5P2_PARTE

0.867

A0E9A7_PARTE

0.867

bPT2

0.867

betaPT7

0.867

betaPT8

0.867

thetaPT2

0.867

iotaPT2

0.867

Your Current Organism:

Paramecium tetraurelia

NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0BDJ3_PARTE	A0DQK3_PARTE	A0BDJ3	A0DQK3	Tubulin domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.867
A0BDJ3_PARTE	betaPT8	A0BDJ3	Q3SEG6	Tubulin domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Beta_tubulin,putative.	0.497
A0BWM1_PARTE	A0DQK3_PARTE	A0BWM1	A0DQK3	Tubulin domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.867
A0C5P1_PARTE	A0C5P2_PARTE	A0C5P1	A0C5P2	Tubulin_C domain-containing protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.526
A0C5P1_PARTE	A0DQK3_PARTE	A0C5P1	A0DQK3	Tubulin_C domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.867
A0C5P2_PARTE	A0C5P1_PARTE	A0C5P2	A0C5P1	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Tubulin_C domain-containing protein.	0.526
A0C5P2_PARTE	A0DQK3_PARTE	A0C5P2	A0DQK3	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.867
A0DQK3_PARTE	A0BDJ3_PARTE	A0DQK3	A0BDJ3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Tubulin domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.867
A0DQK3_PARTE	A0BWM1_PARTE	A0DQK3	A0BWM1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Tubulin domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.867
A0DQK3_PARTE	A0C5P1_PARTE	A0DQK3	A0C5P1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Tubulin_C domain-containing protein.	0.867
A0DQK3_PARTE	A0C5P2_PARTE	A0DQK3	A0C5P2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.867
A0DQK3_PARTE	A0E9A7_PARTE	A0DQK3	A0E9A7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Tubulin domain-containing protein; Belongs to the tubulin family.	0.867
A0DQK3_PARTE	bPT2	A0DQK3	P33188	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.867
A0DQK3_PARTE	betaPT7	A0DQK3	Q3SD83	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Beta tubulin,putative; Belongs to the tubulin family.	0.867
A0DQK3_PARTE	betaPT8	A0DQK3	Q3SEG6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Beta_tubulin,putative.	0.867
A0DQK3_PARTE	iotaPT2	A0DQK3	Q3SEH6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Iota_tubulin,putative; Belongs to the tubulin family.	0.867
A0DQK3_PARTE	thetaPT2	A0DQK3	Q3SEG7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Theta tubuline, putative; Belongs to the tubulin family.	0.867
A0E9A7_PARTE	A0DQK3_PARTE	A0E9A7	A0DQK3	Tubulin domain-containing protein; Belongs to the tubulin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.867
A0E9A7_PARTE	betaPT8	A0E9A7	Q3SEG6	Tubulin domain-containing protein; Belongs to the tubulin family.	Beta_tubulin,putative.	0.492
bPT2	A0DQK3_PARTE	P33188	A0DQK3	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.867