STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0EFT1_PARTEUncharacterized protein. (553 aa)    
Predicted Functional Partners:
A0BD97_PARTE
Uncharacterized protein.
  
 
 0.928
PTMB.431c
40s ribosomal protein S15, putative; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.883
A0CFW1_PARTE
Uncharacterized protein.
  
 
 0.865
A0DA86_PARTE
Uncharacterized protein.
  
 
 0.865
A0CDN7_PARTE
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.860
A0DFC3_PARTE
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.860
A0BFN1_PARTE
Methyltranfer_dom domain-containing protein.
  
 
 0.851
A0BUY8_PARTE
MTS domain-containing protein.
  
 
 0.851
A0BWA9_PARTE
Methyltranfer_dom domain-containing protein.
  
 
 0.851
A0CKA0_PARTE
Uncharacterized protein.
  
 
 0.851
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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