STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rab_C36Rab_C36 protein. (184 aa)    
Predicted Functional Partners:
A0DGB1_PARTE
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.862
A0D1Q7_PARTE
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.828
A0DEI2_PARTE
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.828
A0CRU7_PARTE
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.826
A0D3P8_PARTE
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.826
A0CDI7_PARTE
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.824
A0DFG9_PARTE
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.824
A0D1P4_PARTE
Uncharacterized protein.
    
 0.813
A0DEJ0_PARTE
Uncharacterized protein.
    
 0.813
A0BRK7_PARTE
Uncharacterized protein.
   
 0.812
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
Server load: low (18%) [HD]