STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PtHEN1Protein with similarity to HEN1 (Arabidopsis thaliana). (331 aa)    
Predicted Functional Partners:
A0CS89_PARTE
VASt domain-containing protein.
      
 0.584
A0E626_PARTE
Uncharacterized protein.
      
 0.584
A0DQU7_PARTE
Uncharacterized protein.
      
 0.567
A0C6C4_PARTE
Uncharacterized protein.
      
 0.563
A0CI01_PARTE
Uncharacterized protein.
      
 0.563
A0DWU6_PARTE
Uncharacterized protein.
      
 0.563
A0E2A3_PARTE
C2H2-type domain-containing protein.
      
 0.544
A0DXN3_PARTE
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.508
A0CUN8_PARTE
RNA helicase.
    
 0.499
A0BT79_PARTE
PLD phosphodiesterase domain-containing protein.
      
 0.487
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.