STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTMB.284cStep II splicing factor SLU7, putative. (440 aa)    
Predicted Functional Partners:
A0BES1_PARTE
SFM domain-containing protein.
  
 0.984
A0CS16_PARTE
MI domain-containing protein.
   
 0.984
A0D810_PARTE
SFM domain-containing protein.
  
 0.984
A0ECF9_PARTE
MI domain-containing protein.
   
 0.984
A0CFW0_PARTE
SKIP_SNW domain-containing protein.
   
 
 0.983
A0CX15_PARTE
Sde2_N_Ubi domain-containing protein.
   
 0.983
A0CEF9_PARTE
WD_REPEATS_REGION domain-containing protein.
   
 0.982
A0CTQ2_PARTE
WD_REPEATS_REGION domain-containing protein.
   
 0.982
A0D280_PARTE
Uncharacterized protein.
   
 0.975
A0D281_PARTE
HA2 domain-containing protein.
   
 0.975
Your Current Organism:
Paramecium tetraurelia
NCBI taxonomy Id: 5888
Other names: P. tetraurelia, Paramecium aurelia syngen 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.