STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316YZR6DUF1692-domain-containing protein. (434 aa)    
Predicted Functional Partners:
A0A316Z7J7
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
   0.935
A0A316Z7Y1
TPR_REGION domain-containing protein.
    
   0.935
A0A316ZGA9
DUF1692-domain-containing protein.
  
 
0.918
A0A316ZEG6
ERGIC_N domain-containing protein.
   
 
0.908
A0A316ZLZ0
5-methylaminomethyl-2-thiouridylate-methyltransferase.
  
 0.761
A0A316Z6D0
Uncharacterized protein.
   
   0.549
A0A316ZAD6
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
   0.549
A0A316Z8G5
SPC12-domain-containing protein.
    
   0.521
A0A316Z302
Endoplasmic reticulum oxidoreductin 1.
    
   0.514
A0A316Z9V6
Thioredoxin-like protein.
   
 
 0.508
Your Current Organism:
Tilletiopsis washingtonensis
NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis
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