STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316Z0N7WD40 repeat-like protein. (570 aa)    
Predicted Functional Partners:
A0A316ZEL5
Brix-domain-containing protein.
   
 
 0.945
A0A316Z3M2
TRASH domain-containing protein.
   
 
 0.938
A0A316ZL01
Ebp2-domain-containing protein.
   
 
 0.885
A0A316ZB04
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 
 0.883
A0A316ZLG3
Brix-domain-containing protein.
   
 
 0.881
A0A316ZM20
Ribosomal protein L1.
   
 
 0.880
A0A316Z9V5
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.872
A0A316ZET8
Uncharacterized protein.
   
   0.857
A0A316Z3R4
Protein MAK16; Belongs to the MAK16 family.
   
 
 0.841
A0A316Z9I4
RNA-binding domain-containing protein.
   
 
 0.838
Your Current Organism:
Tilletiopsis washingtonensis
NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis
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