STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316Z232C3H1-type domain-containing protein. (600 aa)    
Predicted Functional Partners:
A0A316ZIL0
Nuclear pore protein.
   
 0.878
A0A316Z1C8
Uncharacterized protein.
   
 0.873
A0A316ZI13
Nucleoporin-domain-containing protein.
   
 0.873
A0A316ZGH1
Uncharacterized protein.
   
 0.870
A0A316ZHA5
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.869
A0A316Z7M3
Nup54 domain-containing protein.
   
 0.867
A0A316Z486
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.865
A0A316Z7K0
Uncharacterized protein.
   
0.864
A0A316ZEY4
WD40 repeat-like protein.
    
 0.864
A0A316Z7W2
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.863
Your Current Organism:
Tilletiopsis washingtonensis
NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis
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