STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316Z4Q5Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (233 aa)    
Predicted Functional Partners:
A0A316Z134
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.998
A0A316Z1Z3
60S ribosomal protein L23.
  
 0.998
A0A316Z254
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 0.998
A0A316Z3E6
Translation protein; Belongs to the universal ribosomal protein uL3 family.
  
 0.998
A0A316ZBH7
Ribosomal protein L2.
 
 0.998
A0A316ZH04
Ribosomal protein S16.
   
 
 0.998
A0A316ZI60
S15/NS1 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.998
A0A316ZJ14
Ribosomal protein S5 domain 2-like protein.
  
 
 0.998
A0A316Z2B3
Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
  
 0.997
A0A316Z6J2
Ribosomal protein L15.
  
 0.997
Your Current Organism:
Tilletiopsis washingtonensis
NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis
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