STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316Z6L4Rab-GAP TBC domain-containing protein. (575 aa)    
Predicted Functional Partners:
A0A316Z4N9
GTP-binding protein ypt1.
    
 0.995
A0A316ZA36
GTP-binding protein rab-2.
    
 0.631
A0A316Z9K9
RabGAP/TBC.
   
 
 0.511
A0A316Z9G6
RabGAP/TBC.
    
 
 0.493
A0A316ZCK1
Putative MDR1-Mac1p interacting protein.
      
 0.489
A0A316ZGB5
RabGAP/TBC.
      
 0.489
A0A316Z970
Iron hydrogenase; Belongs to the NARF family.
   
  
 0.456
A0A316ZDW8
RabGAP/TBC.
      
 0.436
A0A316ZFR6
TPR-like protein.
      
 0.422
Your Current Organism:
Tilletiopsis washingtonensis
NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis
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