STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316Z865Uncharacterized protein. (332 aa)    
Predicted Functional Partners:
A0A316ZL95
MIF4G-domain-containing protein.
   
   0.969
A0A316Z372
PROCN-domain-containing protein.
    
   0.817
A0A316Z0H5
Putative PRP19-non-snRNP spliceosome component required for DNA repair.
    
   0.748
A0A316ZIU6
WD40 repeat-like protein.
    
   0.703
A0A316ZFF5
Putative ribosomal elongation factor EF-2.
    
   0.657
A0A316Z6M2
Putative small nuclear ribonucleo protein F.
    
 
 0.618
A0A316Z671
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
   0.616
A0A316ZIB8
SYF2-domain-containing protein.
   
   0.610
A0A316Z196
WD40 repeat-like protein.
    
   0.609
A0A316Z2U7
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.609
Your Current Organism:
Tilletiopsis washingtonensis
NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis
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