STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316ZA36GTP-binding protein rab-2. (198 aa)    
Predicted Functional Partners:
A0A316ZGC0
RhoGAP-domain-containing protein.
    
 0.971
A0A316ZIS6
DH domain-containing protein.
    
 0.953
A0A316Z277
HMG box domain-containing protein.
   
 0.894
A0A316Z8S5
Uncharacterized protein.
   
 0.894
A0A316ZBZ1
Uncharacterized protein.
   
 0.894
A0A316ZDI2
Uncharacterized protein.
   
 0.894
A0A316ZHI0
DH domain-containing protein.
   
 0.894
A0A316ZE08
E set domain-containing protein.
   
 0.813
A0A316Z0E2
Uncharacterized protein.
    
 0.810
A0A316Z4C4
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.778
Your Current Organism:
Tilletiopsis washingtonensis
NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis
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