STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316ZA95Putative chromatin assembly factor 1 subunit C. (417 aa)    
Predicted Functional Partners:
A0A316Z8H0
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.999
A0A316ZDD1
Histone acetyltransferase type B catalytic subunit; Catalytic component of the histone acetylase B (HAT-B) complex. Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. Involved in DNA double-strand break repair; Belongs to the HAT1 family.
   
 0.999
A0A316Z0V8
Uncharacterized protein.
   
 0.970
A0A316ZH19
Uncharacterized protein.
   
 0.969
A0A316ZK53
HDAC_interact domain-containing protein.
   
 0.961
A0A316ZE67
C-Myb R2r3.
   
 0.954
A0A316Z5W1
PAPA-1 domain-containing protein.
   
 0.950
A0A316Z719
MRG-domain-containing protein.
   
 0.950
A0A316Z9M3
WD40 repeat-like protein.
   
 
 0.950
A0A316Z7V4
SHNi-TPR domain-containing protein.
   
 
 0.947
Your Current Organism:
Tilletiopsis washingtonensis
NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis
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