STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316ZCM9Uncharacterized protein. (964 aa)    
Predicted Functional Partners:
A0A316Z1P9
SPOC domain-like protein.
    
 0.778
A0A316Z1V0
DNA ligase/mRNA capping enzyme.
    
 0.729
A0A316Z6I7
SPOC domain-like protein.
    
 0.714
A0A316ZAC5
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.701
A0A316Z7G6
ATP-dependent DNA ligase.
    
 0.688
A0A316ZC92
DNA ligase.
    
 0.688
A0A316Z6T6
DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
     
 0.554
A0A316Z8L9
Mitochondrial inner membrane protease subunit.
     
 0.531
A0A316Z2S6
DRMBL-domain-containing protein.
   
 
 0.526
A0A316ZA11
Uncharacterized protein.
   
 
 0.526
Your Current Organism:
Tilletiopsis washingtonensis
NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis
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