STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316ZE18DUF427-domain-containing protein. (152 aa)    
Predicted Functional Partners:
A0A316ZFC1
Uncharacterized protein.
    
 0.923
A0A316Z297
Uncharacterized protein.
    
 0.917
A0A316Z8D8
Putative ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family.
    
 0.880
A0A316ZJH8
Putative 5-3 exonuclease.
   
 0.854
LSM1
U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.
    
 0.827
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.786
A0A316Z4E7
YjeF N-terminal domain-like protein.
   
 0.781
A0A316ZAN7
Uncharacterized protein.
   
 0.781
A0A316ZBI3
DFDF domain-containing protein.
   
 0.781
A0A316ZE61
Uncharacterized protein.
   
 0.781
Your Current Organism:
Tilletiopsis washingtonensis
NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis
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