STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316ZET6Putative mago nashi protein. (146 aa)    
Predicted Functional Partners:
A0A316Z4S0
RRM domain-containing protein.
   
 0.999
A0A316ZB29
DEAD-domain-containing protein.
   
 0.997
A0A316ZCU8
Mago-bind domain-containing protein.
    
 
 0.987
A0A316ZHJ9
Smg4_UPF3 domain-containing protein.
    
 0.964
A0A316ZJP1
RRM domain-containing protein.
   
 0.951
A0A316Z774
Putative ATP-dependent RNA helicase.
   
 0.915
A0A316Z410
RRM domain-containing protein.
   
 0.909
A0A316Z671
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
   0.897
A0A316Z6G7
RRM domain-containing protein.
   
 0.871
A0A316ZIU6
WD40 repeat-like protein.
   
  0.866
Your Current Organism:
Tilletiopsis washingtonensis
NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis
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