A0A316ZEY5 protein (Tilletiopsis washingtonensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A316ZEY5

A1pp-domain-containing protein. (309 aa)

Predicted Functional Partners:

A0A316ZEZ5

0.527

A0A316ZGS0

0.527

A0A316Z3Z2

0.473

A0A316Z4K7

0.473

A0A316ZAB6

0.473

A0A316ZF64

0.473

A0A316YYD4

0.446

A0A316ZD37

0.446

A0A316ZCB4

0.426

A0A316ZIB6

0.424

Your Current Organism:

Tilletiopsis washingtonensis

NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A316YYD4	A0A316Z3Z2	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.437
A0A316YYD4	A0A316Z4K7	Uncharacterized protein.	Arginase/deacetylase.	0.437
A0A316YYD4	A0A316ZAB6	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.437
A0A316YYD4	A0A316ZEY5	Uncharacterized protein.	A1pp-domain-containing protein.	0.446
A0A316YYD4	A0A316ZEZ5	Uncharacterized protein.	Arginase/deacetylase.	0.585
A0A316YYD4	A0A316ZF64	Uncharacterized protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.437
A0A316YYD4	A0A316ZGS0	Uncharacterized protein.	Arginase/deacetylase.	0.585
A0A316Z3Z2	A0A316YYD4	Hist_deacetyl domain-containing protein.	Uncharacterized protein.	0.437
A0A316Z3Z2	A0A316Z4K7	Hist_deacetyl domain-containing protein.	Arginase/deacetylase.	0.480
A0A316Z3Z2	A0A316ZD37	Hist_deacetyl domain-containing protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.443
A0A316Z3Z2	A0A316ZEY5	Hist_deacetyl domain-containing protein.	A1pp-domain-containing protein.	0.473
A0A316Z3Z2	A0A316ZEZ5	Hist_deacetyl domain-containing protein.	Arginase/deacetylase.	0.650
A0A316Z3Z2	A0A316ZF64	Hist_deacetyl domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.401
A0A316Z3Z2	A0A316ZGS0	Hist_deacetyl domain-containing protein.	Arginase/deacetylase.	0.760
A0A316Z4K7	A0A316YYD4	Arginase/deacetylase.	Uncharacterized protein.	0.437
A0A316Z4K7	A0A316Z3Z2	Arginase/deacetylase.	Hist_deacetyl domain-containing protein.	0.480
A0A316Z4K7	A0A316ZAB6	Arginase/deacetylase.	Hist_deacetyl domain-containing protein.	0.485
A0A316Z4K7	A0A316ZD37	Arginase/deacetylase.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.448
A0A316Z4K7	A0A316ZEY5	Arginase/deacetylase.	A1pp-domain-containing protein.	0.473
A0A316Z4K7	A0A316ZEZ5	Arginase/deacetylase.	Arginase/deacetylase.	0.648