STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316ZFH8C2H2-type domain-containing protein. (364 aa)    
Predicted Functional Partners:
A0A316Z914
WD40 repeat-like protein.
   
 
 0.943
A0A316ZCL8
Putative RPS17B-ribosomal protein S17.e.B.
 
      0.613
A0A316Z8J7
ARM repeat-containing protein.
   
    0.578
A0A316Z6Z9
Matrin-type domain-containing protein.
   
 
 0.571
A0A316Z6G7
RRM domain-containing protein.
   
 
 0.535
A0A316ZHG3
WD40 repeat-like protein.
   
 
 0.492
A0A316ZI86
RNA-binding domain-containing protein.
   
   0.457
A0A316Z9Q1
Uncharacterized protein.
    
 
 0.452
A0A316Z999
RRM domain-containing protein.
   
   0.447
A0A316Z8P8
RNA-binding domain-containing protein.
   
   0.445
Your Current Organism:
Tilletiopsis washingtonensis
NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis
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