STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316ZFW8RBR-type E3 ubiquitin transferase. (373 aa)    
Predicted Functional Partners:
A0A316ZAM0
RBR-type E3 ubiquitin transferase.
     
0.708
A0A316ZFV5
Tr-type G domain-containing protein.
   
 
 0.623
A0A316Z4M8
Uncharacterized protein.
     
 0.621
A0A316ZBA0
E2_bind domain-containing protein.
   
 
  0.559
A0A316Z2L0
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
     
 0.536
A0A316Z510
Uncharacterized protein.
   
 
  0.527
A0A316ZEA2
Uncharacterized protein.
   
 
  0.527
A0A316ZEG8
HECT-domain-containing protein.
     
 0.488
A0A316ZIV0
DUF913-domain-containing protein.
     
 0.488
A0A316ZG03
Uncharacterized protein.
     
 0.486
Your Current Organism:
Tilletiopsis washingtonensis
NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis
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