STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316ZJA3Uncharacterized protein. (89 aa)    
Predicted Functional Partners:
A0A316ZCF1
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
  0.869
A0A316YYM6
TBP-domain-containing protein.
   
 0.810
A0A316ZH02
Putative SUA7-TFIIB subunit, factor E.
    
 0.807
A0A316ZBP0
TFIIA-domain-containing protein.
    
  0.792
A0A316Z678
Uncharacterized protein.
    
  0.789
A0A316Z3Y2
Uncharacterized protein.
    
  0.787
A0A316Z7D8
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
 0.774
A0A316ZIM9
Putative 25 kd subunit of DNA-directed RNA polymerases I, II and III.
    
  0.773
A0A316Z4A2
RNA polymerase Rpb6.
    
  0.768
A0A316ZFX1
Putative DNA-directed RNA polymerase II chain RPB10.
    
  0.766
Your Current Organism:
Tilletiopsis washingtonensis
NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis
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