A0A316ZJP9 protein (Tilletiopsis washingtonensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A316ZJP9

Uncharacterized protein. (269 aa)

Predicted Functional Partners:

A0A316Z351

0.993

A0A316ZBW3

0.992

A0A316ZC78

0.992

A0A316ZJM4

0.992

A0A316Z0T6

0.991

A0A316Z883

0.991

A0A316Z8H4

0.991

A0A316ZAC3

0.991

A0A316ZDT0

0.991

A0A316ZHK1

0.991

Your Current Organism:

Tilletiopsis washingtonensis

NCBI taxonomy Id: 58919
Other names: ATCC 36489, CBS 544.50, JCM 8362, T. washingtonensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A316Z0T6	A0A316Z351	NADH dehydrogenase, alpha subcomplex, subunit 2.	Uncharacterized protein.	0.999
A0A316Z0T6	A0A316Z883	NADH dehydrogenase, alpha subcomplex, subunit 2.	Uncharacterized protein; Belongs to the complex I LYR family.	0.999
A0A316Z0T6	A0A316Z8H4	NADH dehydrogenase, alpha subcomplex, subunit 2.	Uncharacterized protein.	0.999
A0A316Z0T6	A0A316ZAC3	NADH dehydrogenase, alpha subcomplex, subunit 2.	F420H2 dehydrogenase; Belongs to the complex I 30 kDa subunit family.	0.997
A0A316Z0T6	A0A316ZBW3	NADH dehydrogenase, alpha subcomplex, subunit 2.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
A0A316Z0T6	A0A316ZC78	NADH dehydrogenase, alpha subcomplex, subunit 2.	zf-CHCC domain-containing protein.	0.999
A0A316Z0T6	A0A316ZDT0	NADH dehydrogenase, alpha subcomplex, subunit 2.	NADH dehydrogenase I, D subunit; Belongs to the complex I 49 kDa subunit family.	0.999
A0A316Z0T6	A0A316ZHK1	NADH dehydrogenase, alpha subcomplex, subunit 2.	Putative NADH-ubiquinone oxidoreductase 24 kDa subunit mitochondrial.	0.999
A0A316Z0T6	A0A316ZJM4	NADH dehydrogenase, alpha subcomplex, subunit 2.	NADH dehydrogenase, alpha subcomplex, subunit 6; Belongs to the complex I LYR family.	0.999
A0A316Z0T6	A0A316ZJP9	NADH dehydrogenase, alpha subcomplex, subunit 2.	Uncharacterized protein.	0.991
A0A316Z351	A0A316Z0T6	Uncharacterized protein.	NADH dehydrogenase, alpha subcomplex, subunit 2.	0.999
A0A316Z351	A0A316Z883	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.999
A0A316Z351	A0A316Z8H4	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A316Z351	A0A316ZAC3	Uncharacterized protein.	F420H2 dehydrogenase; Belongs to the complex I 30 kDa subunit family.	0.999
A0A316Z351	A0A316ZBW3	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
A0A316Z351	A0A316ZC78	Uncharacterized protein.	zf-CHCC domain-containing protein.	0.999
A0A316Z351	A0A316ZDT0	Uncharacterized protein.	NADH dehydrogenase I, D subunit; Belongs to the complex I 49 kDa subunit family.	0.999
A0A316Z351	A0A316ZHK1	Uncharacterized protein.	Putative NADH-ubiquinone oxidoreductase 24 kDa subunit mitochondrial.	0.999
A0A316Z351	A0A316ZJM4	Uncharacterized protein.	NADH dehydrogenase, alpha subcomplex, subunit 6; Belongs to the complex I LYR family.	0.999
A0A316Z351	A0A316ZJP9	Uncharacterized protein.	Uncharacterized protein.	0.993