STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR70966.1Hypothetical protein. (225 aa)    
Predicted Functional Partners:
SDR70937.1
Uncharacterized protein YcnI.
  
  
 0.963
SDT27423.1
Putative copper resistance protein D.
  
 0.925
SDR78037.1
Integral membrane protein.
   
    0.769
SDS15740.1
Thioredoxin reductase.
    
   0.710
SDT28006.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
   0.710
SDR70909.1
Hypothetical protein.
       0.606
SDS45494.1
Hypothetical protein.
  
     0.538
SDS61113.1
Hypothetical protein.
  
    0.490
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.463
SDT08835.1
Lysophospholipase L1.
  
     0.455
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.