STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR97814.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
SDS77665.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
  
 
 0.802
SDR97767.1
Hypothetical protein.
       0.773
SDR97979.1
Succinyldiaminopimelate transaminase.
  
    0.725
SDR97909.1
NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.720
SDR97710.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.560
SDR79992.1
N-acetylglucosamine 6-phosphate deacetylase.
     
 0.475
SDR98106.1
Citrate synthase; Belongs to the citrate synthase family.
       0.456
SDR80502.1
N-acetylneuraminate synthase.
  
  
 0.454
SDT01341.1
Ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit.
      
 0.447
SDS82156.1
Thioredoxin; Belongs to the thioredoxin family.
      
 0.424
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.