Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS00275.1 | SDS00331.1 | SAMN04489721_0625 | SAMN04489721_0626 | Bacteriocin biosynthesis cyclodehydratase domain-containing protein. | Putative hydrolase. | 0.665 |
SDS00275.1 | SDS00379.1 | SAMN04489721_0625 | SAMN04489721_0627 | Bacteriocin biosynthesis cyclodehydratase domain-containing protein. | PDZ domain-containing protein. | 0.477 |
SDS00331.1 | SDS00275.1 | SAMN04489721_0626 | SAMN04489721_0625 | Putative hydrolase. | Bacteriocin biosynthesis cyclodehydratase domain-containing protein. | 0.665 |
SDS00331.1 | SDS00379.1 | SAMN04489721_0626 | SAMN04489721_0627 | Putative hydrolase. | PDZ domain-containing protein. | 0.705 |
SDS00331.1 | SDS00470.1 | SAMN04489721_0626 | SAMN04489721_0628 | Putative hydrolase. | Hypothetical protein. | 0.587 |
SDS00331.1 | SDS21537.1 | SAMN04489721_0626 | SAMN04489721_0953 | Putative hydrolase. | Membrane alanyl aminopeptidase Metallo peptidase. MEROPS family M01. | 0.452 |
SDS00331.1 | SDS42965.1 | SAMN04489721_0626 | SAMN04489721_1306 | Putative hydrolase. | DNA polymerase III, delta subunit. | 0.551 |
SDS00331.1 | SDS46350.1 | SAMN04489721_0626 | SAMN04489721_1360 | Putative hydrolase. | MerR HTH family regulatory protein. | 0.663 |
SDS00379.1 | SDS00275.1 | SAMN04489721_0627 | SAMN04489721_0625 | PDZ domain-containing protein. | Bacteriocin biosynthesis cyclodehydratase domain-containing protein. | 0.477 |
SDS00379.1 | SDS00331.1 | SAMN04489721_0627 | SAMN04489721_0626 | PDZ domain-containing protein. | Putative hydrolase. | 0.705 |
SDS00379.1 | SDS00470.1 | SAMN04489721_0627 | SAMN04489721_0628 | PDZ domain-containing protein. | Hypothetical protein. | 0.628 |
SDS00379.1 | SDS00567.1 | SAMN04489721_0627 | SAMN04489721_0629 | PDZ domain-containing protein. | Methyltransferase domain-containing protein. | 0.473 |
SDS00379.1 | SDS21537.1 | SAMN04489721_0627 | SAMN04489721_0953 | PDZ domain-containing protein. | Membrane alanyl aminopeptidase Metallo peptidase. MEROPS family M01. | 0.449 |
SDS00379.1 | SDS35035.1 | SAMN04489721_0627 | SAMN04489721_1169 | PDZ domain-containing protein. | tRNA (adenine-58-N(1)-) methyltransferase. | 0.460 |
SDS00379.1 | SDS42965.1 | SAMN04489721_0627 | SAMN04489721_1306 | PDZ domain-containing protein. | DNA polymerase III, delta subunit. | 0.576 |
SDS00379.1 | SDS44287.1 | SAMN04489721_0627 | SAMN04489721_1330 | PDZ domain-containing protein. | DivIVA domain-containing protein. | 0.495 |
SDS00379.1 | SDS46350.1 | SAMN04489721_0627 | SAMN04489721_1360 | PDZ domain-containing protein. | MerR HTH family regulatory protein. | 0.483 |
SDS00379.1 | SDS53335.1 | SAMN04489721_0627 | SAMN04489721_1481 | PDZ domain-containing protein. | Methyltransferase small domain-containing protein. | 0.432 |
SDS00470.1 | SDS00331.1 | SAMN04489721_0628 | SAMN04489721_0626 | Hypothetical protein. | Putative hydrolase. | 0.587 |
SDS00470.1 | SDS00379.1 | SAMN04489721_0628 | SAMN04489721_0627 | Hypothetical protein. | PDZ domain-containing protein. | 0.628 |
page 1 of 3