STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS01650.1ABC-2 type transport system permease protein. (524 aa)    
Predicted Functional Partners:
SDS01609.1
ABC-2 type transport system ATP-binding protein.
 
    0.957
SDS01770.1
Protein of unknown function.
       0.772
SDR85611.1
Hypothetical protein.
  
     0.577
SDT30803.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
 0.574
SDT27476.1
Hypothetical protein.
  
     0.538
SDS30446.1
Regulatory protein, luxR family.
  
   0.490
SDS01158.1
CDP-alcohol phosphatidyltransferase.
  
     0.486
SDR78037.1
Integral membrane protein.
  
     0.477
SDS01283.1
CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase.
  
     0.473
SDS13176.1
Protein of unknown function DUF58.
  
     0.472
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.