STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS03271.1Protocatechuate 3,4-dioxygenase, beta subunit. (265 aa)    
Predicted Functional Partners:
SDS03392.1
Protocatechuate 3,4-dioxygenase, alpha subunit.
 
 
0.997
SDS03460.1
3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.995
SDS03236.1
P-hydroxybenzoate 3-monooxygenase.
 
 0.993
SDS03548.1
3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase.
 
 
 0.987
SDS03645.1
3-oxoacid CoA-transferase subunit A.
  
 
 0.850
SDS03682.1
3-oxoacid CoA-transferase subunit B.
  
 
 0.850
SDS77799.1
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
     
 0.795
SDR71734.1
2-polyprenyl-6-methoxyphenol hydroxylase.
 
 
 0.655
SDS03171.1
DNA-binding transcriptional regulator, IclR family.
   
 0.620
SDT37021.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.578
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.