STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS05530.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (436 aa)    
Predicted Functional Partners:
SDS05610.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.988
SDS83652.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
 0.892
SDS87873.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
 0.891
SDS05667.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.884
SDR83033.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.869
SDS83690.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
   
  0.861
SDT39099.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
   
  0.861
SDT39120.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.854
SDS84352.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.814
SDT18263.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.793
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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