STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS34984.1Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. (224 aa)    
Predicted Functional Partners:
SDS35035.1
tRNA (adenine-58-N(1)-) methyltransferase.
      0.983
hisE
phosphoribosyl-ATP pyrophosphatase.
      0.888
SDS09838.1
Trehalose 6-phosphate synthase/phosphatase.
    
 0.849
SDT24489.1
Alpha,alpha-trehalose phosphorylase.
 
 
 0.847
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.790
SDR76403.1
Transcriptional antiterminator, BglG family.
    
  0.769
SDS61036.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
     
 0.764
SDS75571.1
Riboflavin synthase alpha chain.
   
 
  0.764
SDS75516.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
  0.756
SDS34890.1
Predicted ATP-dependent carboligase, ATP-grasp superfamily.
 
     0.727
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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