Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS46688.1 | SDS46738.1 | SAMN04489721_1366 | SAMN04489721_1367 | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | Phytoene/squalene synthetase. | 0.981 |
SDS46688.1 | SDS46805.1 | SAMN04489721_1366 | SAMN04489721_1368 | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | Phytoene desaturase. | 0.908 |
SDS46688.1 | SDS46859.1 | SAMN04489721_1366 | SAMN04489721_1369 | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | Lycopene cyclase domain-containing protein. | 0.903 |
SDS46688.1 | SDS46920.1 | SAMN04489721_1366 | SAMN04489721_1370 | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | Lycopene cyclase domain-containing protein. | 0.913 |
SDS46688.1 | SDS46968.1 | SAMN04489721_1366 | SAMN04489721_1371 | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | 4-hydroxybenzoate polyprenyltransferase. | 0.908 |
SDS46688.1 | SDS47013.1 | SAMN04489721_1366 | SAMN04489721_1372 | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | Heat shock protein Hsp15. | 0.616 |
SDS46688.1 | SDS47049.1 | SAMN04489721_1366 | SAMN04489721_1373 | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | Hypothetical protein. | 0.557 |
SDS46688.1 | idi | SAMN04489721_1366 | SAMN04489721_1365 | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.996 |
SDS46738.1 | SDS46688.1 | SAMN04489721_1367 | SAMN04489721_1366 | Phytoene/squalene synthetase. | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | 0.981 |
SDS46738.1 | SDS46805.1 | SAMN04489721_1367 | SAMN04489721_1368 | Phytoene/squalene synthetase. | Phytoene desaturase. | 0.999 |
SDS46738.1 | SDS46859.1 | SAMN04489721_1367 | SAMN04489721_1369 | Phytoene/squalene synthetase. | Lycopene cyclase domain-containing protein. | 0.966 |
SDS46738.1 | SDS46920.1 | SAMN04489721_1367 | SAMN04489721_1370 | Phytoene/squalene synthetase. | Lycopene cyclase domain-containing protein. | 0.968 |
SDS46738.1 | SDS46968.1 | SAMN04489721_1367 | SAMN04489721_1371 | Phytoene/squalene synthetase. | 4-hydroxybenzoate polyprenyltransferase. | 0.971 |
SDS46738.1 | SDS47013.1 | SAMN04489721_1367 | SAMN04489721_1372 | Phytoene/squalene synthetase. | Heat shock protein Hsp15. | 0.670 |
SDS46738.1 | SDS47049.1 | SAMN04489721_1367 | SAMN04489721_1373 | Phytoene/squalene synthetase. | Hypothetical protein. | 0.604 |
SDS46738.1 | SDS47729.1 | SAMN04489721_1367 | SAMN04489721_1386 | Phytoene/squalene synthetase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.442 |
SDS46738.1 | idi | SAMN04489721_1367 | SAMN04489721_1365 | Phytoene/squalene synthetase. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.954 |
SDS46805.1 | SDS46688.1 | SAMN04489721_1368 | SAMN04489721_1366 | Phytoene desaturase. | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | 0.908 |
SDS46805.1 | SDS46738.1 | SAMN04489721_1368 | SAMN04489721_1367 | Phytoene desaturase. | Phytoene/squalene synthetase. | 0.999 |
SDS46805.1 | SDS46859.1 | SAMN04489721_1368 | SAMN04489721_1369 | Phytoene desaturase. | Lycopene cyclase domain-containing protein. | 0.975 |
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