Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS47403.1 | SDS47439.1 | SAMN04489721_1380 | SAMN04489721_1381 | Membrane protein. | Predicted PurR-regulated permease PerM. | 0.616 |
SDS47403.1 | SDS47481.1 | SAMN04489721_1380 | SAMN04489721_1382 | Membrane protein. | Probable blue pigment (indigoidine) exporter. | 0.615 |
SDS47403.1 | SDS47525.1 | SAMN04489721_1380 | SAMN04489721_1383 | Membrane protein. | DNA-binding transcriptional regulator, MarR family. | 0.457 |
SDS47439.1 | SDS47403.1 | SAMN04489721_1381 | SAMN04489721_1380 | Predicted PurR-regulated permease PerM. | Membrane protein. | 0.616 |
SDS47439.1 | SDS47481.1 | SAMN04489721_1381 | SAMN04489721_1382 | Predicted PurR-regulated permease PerM. | Probable blue pigment (indigoidine) exporter. | 0.774 |
SDS47439.1 | SDS47525.1 | SAMN04489721_1381 | SAMN04489721_1383 | Predicted PurR-regulated permease PerM. | DNA-binding transcriptional regulator, MarR family. | 0.563 |
SDS47439.1 | SDT07522.1 | SAMN04489721_1381 | SAMN04489721_2461 | Predicted PurR-regulated permease PerM. | Hypothetical protein. | 0.402 |
SDS47481.1 | SDS47403.1 | SAMN04489721_1382 | SAMN04489721_1380 | Probable blue pigment (indigoidine) exporter. | Membrane protein. | 0.615 |
SDS47481.1 | SDS47439.1 | SAMN04489721_1382 | SAMN04489721_1381 | Probable blue pigment (indigoidine) exporter. | Predicted PurR-regulated permease PerM. | 0.774 |
SDS47481.1 | SDS47525.1 | SAMN04489721_1382 | SAMN04489721_1383 | Probable blue pigment (indigoidine) exporter. | DNA-binding transcriptional regulator, MarR family. | 0.904 |
SDS47525.1 | SDS47403.1 | SAMN04489721_1383 | SAMN04489721_1380 | DNA-binding transcriptional regulator, MarR family. | Membrane protein. | 0.457 |
SDS47525.1 | SDS47439.1 | SAMN04489721_1383 | SAMN04489721_1381 | DNA-binding transcriptional regulator, MarR family. | Predicted PurR-regulated permease PerM. | 0.563 |
SDS47525.1 | SDS47481.1 | SAMN04489721_1383 | SAMN04489721_1382 | DNA-binding transcriptional regulator, MarR family. | Probable blue pigment (indigoidine) exporter. | 0.904 |
SDT07522.1 | SDS47439.1 | SAMN04489721_2461 | SAMN04489721_1381 | Hypothetical protein. | Predicted PurR-regulated permease PerM. | 0.402 |