STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS47638.1Hypothetical protein. (305 aa)    
Predicted Functional Partners:
SDS08484.1
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.726
SDR91620.1
Cell division protein FtsB.
 
     0.653
SDS23005.1
Protein of unknown function.
  
     0.520
SDS01770.1
Protein of unknown function.
  
     0.445
SDS33000.1
Hypothetical protein.
  
     0.442
SDS42965.1
DNA polymerase III, delta subunit.
 
     0.441
SDS18425.1
Hypothetical protein.
 
     0.437
SDT21511.1
Putative Holin-X, holin superfamily III.
  
     0.435
SDS47729.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.432
SDS47681.1
Hypothetical protein.
       0.431
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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