STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS47769.1Sulfate permease, SulP family. (561 aa)    
Predicted Functional Partners:
SDR94029.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
 
 
 0.969
SDS47831.1
Transcriptional regulator, ArsR family.
 
     0.897
SDS08758.1
Protein-tyrosine phosphatase.
    
   0.757
SDS12341.1
Hypothetical protein.
    
   0.705
SDS37010.1
Menaquinol-cytochrome c reductase cytochrome b subunit precursor.
    
   0.705
SDT40780.1
Ubiquinol-cytochrome c reductase cytochrome b subunit.
    
   0.705
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
   0.704
SDT19824.1
L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.685
SDS47882.1
Helix-turn-helix domain-containing protein.
       0.542
SDS47681.1
Hypothetical protein.
       0.520
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.