STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS52165.1Amino acid ABC transporter ATP-binding protein, PAAT family. (271 aa)    
Predicted Functional Partners:
SDS52094.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 
  0.980
SDT09849.1
Polar amino acid transport system permease protein.
 
  0.975
SDS52015.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
  0.971
SDS52072.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
  0.971
SDR87046.1
Amino acid ABC transporter membrane protein, PAAT family.
 
  0.967
SDT28100.1
Amino acid ABC transporter membrane protein, PAAT family.
 
  0.964
SDT06416.1
Amino acid ABC transporter membrane protein, PAAT family.
 
  0.963
SDR70173.1
ATP-binding cassette, subfamily B.
     
0.900
SDS15434.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
    0.871
SDS41493.1
Putative ABC transport system permease protein.
  
 0.862
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.